BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E11SP1|AL425885
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1479 1598 0.0
3x_Contig19 456 e-128
>3x_Contig1479
Length = 7316
Score = 1598 bits (806), Expect = 0.0
Identities = 806/806 (100%)
Strand = Plus / Minus
Query: 1 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 811
Query: 61 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 751
Query: 121 ggcgacatcacggacatcacaagcaagaccagctggctggttaaatgggccttcatattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggcgacatcacggacatcacaagcaagaccagctggctggttaaatgggccttcatattc 691
Query: 181 tggagttgtcttcaaggcttgattaacgatatcagcagaggtattcaaggaagacttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tggagttgtcttcaaggcttgattaacgatatcagcagaggtattcaaggaagacttagc 631
Query: 241 caaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagtcaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 caaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagtcaaatt 571
Query: 301 gaatgtagaattgttgtcctttacaaaatcccaggccaacttttcggcatatttcttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaatgtagaattgttgtcctttacaaaatcccaggccaacttttcggcatatttcttaga 511
Query: 361 agcaatgtatgcagtaacggagttttcacgagcttcttcccaggtgataggattccaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agcaatgtatgcagtaacggagttttcacgagcttcttcccaggtgataggattccaaga 451
Query: 421 agtttcatcatgaatgaaatttgggtcaccggcatgatctaagcgcatgatagctgcata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agtttcatcatgaatgaaatttgggtcaccggcatgatctaagcgcatgatagctgcata 391
Query: 481 ggaagatgtaacaattacatgttcgacgttcttaccgtatttttgaatagactcaaggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggaagatgtaacaattacatgttcgacgttcttaccgtatttttgaatagactcaaggac 331
Query: 541 agacttggtaccgtgagtggccggaatcaagtagttttcttcgttgctctttgtcaaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agacttggtaccgtgagtggccggaatcaagtagttttcttcgttgctctttgtcaaacc 271
Query: 601 aaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttttggaaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttttggaaaac 211
Query: 661 agcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtacttaccatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 agcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtacttaccatt 151
Query: 721 tgggtgttccttagccaattccttcttaattggctcagctttttcttcagaacgaactgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tgggtgttccttagccaattccttcttaattggctcagctttttcttcagaacgaactgt 91
Query: 781 accaacgacttcataaccagcagcta 806
||||||||||||||||||||||||||
Sbjct: 90 accaacgacttcataaccagcagcta 65
Score = 646 bits (326), Expect = 0.0
Identities = 419/450 (93%)
Strand = Plus / Minus
Query: 1 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 2870
Query: 61 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 2810
Query: 121 ggcgacatcacggacatcacaagcaagaccagctggctggttaaatgggccttcatattc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2809 ggcgacatcacggacatcacaagcaacaccagctggctggttaaatgggccttcatattc 2750
Query: 181 tggagttgtcttcaaggcttgattaacgatatcagcagaggtattcaaggaagacttagc 240
|||||||||||||||||| | || |||| ||||||||||| || ||||||| | ||||
Sbjct: 2749 tggagttgtcttcaaggccttgttgacgaagtcagcagaggtgtttaaggaagccctagc 2690
Query: 241 caaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagtcaaatt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2689 taaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagtcaaatt 2630
Query: 301 gaatgtagaattgttgtcctttacaaaatcccaggccaacttttcggcatatttcttaga 360
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 2629 gaatgtagaattgttgtccttcacgaaatcccaggccaacttttcggcatatttcttaga 2570
Query: 361 agcaatgtatgcagtaacggagttttcacgagcttcttcccaggtgataggattccaaga 420
||||| |||| |||| ||| | ||||||||| |||||||| ||| || |||||||
Sbjct: 2569 agcaacatatgaagtagcggcatcttcacgagcgtcttcccaaatgaccgggttccaagt 2510
Query: 421 agtttcatcatgaatgaaatttgggtcacc 450
||||||||||| |||||| ||||||||||
Sbjct: 2509 agtttcatcattgatgaaagttgggtcacc 2480
Score = 630 bits (318), Expect = 0.0
Identities = 330/334 (98%)
Strand = Plus / Minus
Query: 473 gctgcataggaagatgtaacaattacatgttcgacgttcttaccgtatttttgaatagac 532
|||||| ||||||| ||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 2457 gctgcaaaggaagaagtaactactacatgttcgacgttcttaccgtatttttgaatagac 2398
Query: 533 tcaaggacagacttggtaccgtgagtggccggaatcaagtagttttcttcgttgctcttt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2397 tcaaggacagacttggtaccgtgagtggccggaatcaagtagttttcttcgttgctcttt 2338
Query: 593 gtcaaaccaaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2337 gtcaaaccaaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttt 2278
Query: 653 tggaaaacagcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtac 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2277 tggaaaacagcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtac 2218
Query: 713 ttaccatttgggtgttccttagccaattccttcttaattggctcagctttttcttcagaa 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2217 ttaccatttgggtgttccttagccaattccttcttaattggctcagctttttcttcagaa 2158
Query: 773 cgaactgtaccaacgacttcataaccagcagcta 806
||||||||||||||||||||||||||||||||||
Sbjct: 2157 cgaactgtaccaacgacttcataaccagcagcta 2124
>3x_Contig19
Length = 772
Score = 456 bits (230), Expect = e-128
Identities = 230/230 (100%)
Strand = Plus / Plus
Query: 577 ttcttcgttgctctttgtcaaaccaaacgagaatggagaagcagtgtgcaggacgtattt 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ttcttcgttgctctttgtcaaaccaaacgagaatggagaagcagtgtgcaggacgtattt 72
Query: 637 caagtcagtgtgcttttggaaaacagcatcgaaagcgtttggagctgcgatatcaacaac 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 caagtcagtgtgcttttggaaaacagcatcgaaagcgtttggagctgcgatatcaacaac 132
Query: 697 gacttcgaattggtacttaccatttgggtgttccttagccaattccttcttaattggctc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gacttcgaattggtacttaccatttgggtgttccttagccaattccttcttaattggctc 192
Query: 757 agctttttcttcagaacgaactgtaccaacgacttcataaccagcagcta 806
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agctttttcttcagaacgaactgtaccaacgacttcataaccagcagcta 242
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5814
Number of Sequences: 1807
Number of extensions: 5814
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 2
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)